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afq

Automated Fiber Quantification

bids-examples

A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.

bids-specification

Brain Imaging Data Structure (BIDS) Specification

bids-starter-kit

Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets

bids_tools

Some BIDS tools for ieeg

bpc_jupyter

Jupyter notebook for the basis profile curves

brainbeat

BrainBeats code for publication in Human Brain Mapping

ccep

ccep analyses

crp_scripts

Canonical Response Parameterization Code

databook_matlab

Matlab files with demo code intended as a companion to the book "Data-Driven Science and Engineering: Machine Learning, Dynamical Systems, and Control" by Steven L. Brunton and J. Nathan Kutz http://www.databookuw.com/

ecogbasiccode

repository for basic ECoG analysis scripts

gammamodel

model to predict ECoG gamma oscillations

hapwave

Repository for code related to the limbic circuit CCEP analyses

hed-schemas

Repository for HED schemas. The SCORE library for clinical annotations is now available.

hed-specification

Specification documents for HED (Hierarchical Event Descriptors)

ieeg_respect_bids

Basic script to read an annotated micromed TRC file and build the BIDS structure

inflatedbrain

jhub-image

mef_reader_fieldtrip

FieldTrip external toolbox to read MEF 2.1/3.0 formatted datasets

mnl_bidstools

Bids tools for Matlab

mnl_ccepage

Repository to publicly share code to analyze/visualize CCEP data in BIDS

mnl_dmri_ieeg_tools

tools for integrating dMRI and iEEG data in Matlab

mnl_ieegbasics

basic code to analyze iEEG data

mnl_seegview

SEEG plotting tools in canonical AC-PC slices

nix-mx

NIX MATLAB bindings

nsdieegprep

Repository for (pre)processing NSD iEEG data.

paper_hermes_2010_jneurometh

ECoG electrode localization toolbox

paper_hermes_2015_cercortex

paper_hermes_2017_plosbiology

code to download data and generate figures from Hermes, Nguyen and Winawer 2017, PLOS Biology

paper_hermes_2019_elife

code to reproduce figures from Hermes, Petridou, Kay and Winawer. "An image-computable model for the stimulus selectivity of gamma oscillations", eLife 2019