doh-sml1303 Goto Github PK
Name: Steph Lunn
Type: User
Bio: Bioinformatician. WA DOH PHL.
Twitter: ess3lle
Location: Seattle, Washington
Steph Lunn's Projects
doh-sml1303.github.io
genomic_epi
A collection of miscellaneous scripts for Genomic Epidemiology purposes
ncov
Nextstrain build for novel coronavirus SARS-CoV-2
ncov-wa-build
Augur build for Washington SARS-CoV-2 sequences.
pathogen-repo-guide
Washington state SARS-CoV-2 focused pathogen-repo-guide from https://github.com/nextstrain/pathogen-repo-guide
viral-genomics-workshop
wa_mpxv
WA-focused config files for mpxv nextstrain
wa_ncov_profile
wa_omicron
wa_sc2
WA-focused build for ncov Nextstrain
wastewater_surveillance
Scripts to analyze wastewater sequencing data from Freyja pipeline and create files used as input for Data-Flo/Microreact Dashboard
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