dkoes Goto Github PK
Name: David Koes
Type: User
Company: University of Pittsburgh
Bio: Removing barriers to computational drug discovery one bit at a time.
Twitter: david_koes
Location: Pittsburgh
Blog: http://bits.csb.pitt.edu
Name: David Koes
Type: User
Company: University of Pittsburgh
Bio: Removing barriers to computational drug discovery one bit at a time.
Twitter: david_koes
Location: Pittsburgh
Blog: http://bits.csb.pitt.edu
scripts for training on ANI data
APBS and PDB2PQR software
Solvent accessible surface area of PDB files
A simple jquery plugin for asking a question and recording the answer
Conda recipes for the bioconda channel.
Caesar is a research project designed to facilitate crowd-sourced collaborative code review in software engineering classes.
The #1 free and open source CDN built to make life easier for developers.
CellProfiler is open-source cellular image analysis software.
Chai-1, SOTA model for biomolecular structure prediction
CHAP is a tool for the functional annotation of ion channel structures:
This is a fork I made a long time ago of the LLVM commandline handling class since I liked it so much.
Drug Design Data Resource is a suite of software to enable filtering, docking, and scoring of new sequences from wwpdb.
Documentation for the Koes Research Group. Most likely woefully inadequate.
Web interface for tracking effort on projects within a small to medium organization
Create clusters of VMs on the cloud and configure them with Ansible.
EquiBind: geometric deep learning for fast predictions of the 3D structure in which a small molecule binds to a protein
A molecular viewer written in Javascript and WebGL
Paper for release
zero configuration Python/Unix web based teaching env
Under development
Deep generative models for structure-based drug discovery
Executes linear MD simulations with AMBER in order to simulate distance or RMSD changes without bias of steered molecular dynamics
Create coarse grain Martini input files for Gromacs from (atomistic) pdb files.
Slack plugin to render math using MathJax
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.