How to set vmax and vmin of cmap in ClusterMapPlotter() about pycomplexheatmap HOT 7 CLOSED

Were you using the latest version of PyComplexHeatmap? If not, please upgrade to the latest version. @XuejianXiong

from pycomplexheatmap.

Thank you @DingWB. I upgraded to the version 1.7.3, but still have the same problem.

from pycomplexheatmap.

This is weird; this bug was fixed a long time ago.
Please print print(heatmap.kwargs['vmax'],heatmap.kwargs['vmin'],heatmap.legend_kws) after running heatmap = pch.ClusterMapPlotter(**) and show me the output.
@XuejianXiong

from pycomplexheatmap.

The output looks good "30 0 {'vmin': 0, 'vmax': 30}". However in the figures (attached), it still shows different values in the legend for different heatmaps.

@DingWB

from pycomplexheatmap.

Please install the latest version from github, and follow this example to see whether the legend has the same vmax and vmin as provided in the code (vmin=-2.2,vmax=2.3,).

If it is still not working, then you need to paste your data and code here.

from pycomplexheatmap.

Hi @XuejianXiong ,

How is it going? Did it work?

from pycomplexheatmap.

Hi @DingWB,

It worked! It seems my virtual environment caused issues with the package upgrading. I have to manually delete the old version and reinstall using pip.
Thank you for your help!

Best,
Xuenjian

from pycomplexheatmap.