Comments (6)
You should use anno_label
, instead of show_rownames
. Please refer to this link, which will tell you how to show the selected feature names.
Briefly, you need to create a anno_label
in row annotations. In the parameter df
of anno_label
, index should be same as data in ClusterMapPlotter
, while values should be either the names you want to show or NaN (the rows you do not want to show).
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great, thanks a lot for your quick response.
one more question, in HeatmapAnnotation if anno_label is put as first one, it goes to top or left, but sometimes in HeatmapAnnotation I only have anno_label no others like anno_simple, how can I make the label appears on right or bottom?
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This is a good question. Please refer to this link.
You can add a parameter orientation
to change the direction. Please let me know whether it works for you.
from pycomplexheatmap.
sorry orientation doesn't appear to work
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Could you please give me an example dataset so that I can debug it?
from pycomplexheatmap.
Thanks for your feedback. It's really helpful for me to debug it.
Please upgrade the package to the latest version and refer to this link.
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Related Issues (16)
- The color of the histogram does not match the original data frame HOT 1
- The color of the histogram does not match the original data frame
- How to change the direction of the horizontal bar graph HOT 1
- I think you have repaired it, so I upgraded to the latest version(v1.2.7), but it ran incorrectly HOT 2
- GH tag for 1.3.1 is missing HOT 1
- support bar label ? HOT 5
- RuntimeWarning: invalid value encountered in double_scalars HOT 1
- How to export the clustering? HOT 1
- Questions about legend and colorbar settings HOT 21
- Question about the function of `row_split` or `col_split` HOT 13
- Question about the legend visualization. HOT 1
- barplot not correct(anno 0-0.05, should 0-0.5 like legend) HOT 4
- Incomplete display of column name HOT 1
- How to set the precision of numbers HOT 1
- How to increase the distance between annotations HOT 1
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