Related Issues (20)
- The SAM/BAM file declares less than one reference sequence! HOT 2
- genomeSAsparseD option for RSEM Star?
- Problem implementing a reverse-strand specific analysis HOT 2
- about gffcompare
- RSEM deal with multimapping? HOT 1
- Pearl error
- error when using convert-sam-for-rsem to a RSEM compatible BAM file.
- rsem-prepare-reference arguments
- Using STAR BAMs from genomic alignment HOT 2
- rsem-parse-alignments and rsem-build-read-index
- Gtf file
- cleaned.fq.gz: command not found HOT 3
- Two mates are aligned to two different transcripts HOT 1
- rsem-generate-ngvector command not found HOT 1
- bam only containing aligned reads produced different expression profile
- Not sure if rsem is using --num-threads option...
- fatal error: buffer size for SJ output is too small Solution: increase input parameter --limitOutSJcollapsed HOT 3
- Single-end fragment length mean and SD
- Different read counts from STAR and RSEM HOT 1
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from rsem.