decodegenetics Goto Github PK
Type: Organization
Type: Organization
Quality control for BAM files
Filter for BAM-files
Chops a bam index file into pieces
Population-scale genotyping using pangenome graphs
Recommended Graphtyper pipelines
VCF files of SVs using long-read sequencing (LRS).
Scripts for mDNM analysis and the data the analysis was run on.
Signal-level algorithms for MinION data
Extension to nanopolish to compute alt-ref allele likelihood differences for suggested SVs using the squiggles of reads involved.
Modelling Length Distributions of NCO Events and Gene Conversion Tracts
PopSTR - A Population based microsatellite genotyper
Lossless VCF compression
Supplementary code for the article "Large-scale plasma proteomics comparisons through genetics and disease associations"
Hybrid error correction of long reads using colored de Bruijn graphs
Detects human contamination in bam files
Scrappie is a technology demonstrator for the Oxford Nanopore Research Algorithms group
A SeqAn 2.1 fork that can use htslib
Sample run with test data on the squigglesv branch of Nanopolish
Forms SV cliques using the CAST (Cluster Affinity Search Technique) algorithm.
Structural variant merging tool
Swipe your Structural Variants called on long (ONT/PacBio) reads with short exact (Illumina) reads.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.