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David Lougheed's Projects

backtack icon backtack

Made with a team at Hack the North 2016 in 36 hours. Ranks posts on a user's screen by how much they might want to argue with them (user engagement!)

bcf_extras icon bcf_extras

Extra variant file helper utilities built on top of bcftools.

comptg2 icon comptg2

Telomeric allele scoring tool for output from Telogator2.

cv icon cv

My curriculum vitae

download_giab icon download_giab

Utility Python package to download Genome-in-a-Bottle data from their index files.

fake-frog icon fake-frog

An Arduino-based project to build a frog-shaped temperature logger

igv.js icon igv.js

Embeddable genomic visualization component based on the Integrative Genomics Viewer

reformed icon reformed

A document format conversion service based on Pandoc.

snipe icon snipe

A web tool for optimally choosing eDNA primer pairs to identify a set of taxa.

strkit icon strkit

A short tandem repeat (STR) genotyping and analysis toolkit for long reads

strkit_rust_ext icon strkit_rust_ext

Extension for STRKit with components written in Rust, for improved performance.

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