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David Steinberg's Projects

adam icon adam

ADAM is a genomics analysis platform with specialized file formats built using Apache Avro, Apache Spark and Parquet. Apache 2 licensed.

api-example-flask icon api-example-flask

An example Python app on 23andMe's genome API using the flask microframework.

artificial-intelligence-deep-learning-machine-learning-tutorials icon artificial-intelligence-deep-learning-machine-learning-tutorials

A comprehensive list of Deep Learning, Machine Learning and Artificial Intelligence tutorials - originally created by Donne Martin and will be expanded in areas of AI/Deep Learning / Machine Vision and industry specific areas such as Automotives, Retail, Pharma, Medicine, Healthcare by Tarry Singh until atleast 2020 until he finishes his Ph.D. (which might end up being inter-stellar cosmic networks! Who knows! 😀)

bcbio-nextgen icon bcbio-nextgen

Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis

bh17 icon bh17

This repository catalogs work done at BioHackathon 2017

brca-exchange icon brca-exchange

Overall management and deployment of the BRCA Exchange web portal and pipeline scripts

brew icon brew

🍺 The missing package manager for macOS

bwa icon bwa

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

celldb icon celldb

celldb - Database for functional genomics

celldb-etl-10x icon celldb-etl-10x

Performs the ETL processing for 10x Genomics Single Cell RNA-Sequencing data into celldb

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