danmaclean Goto Github PK

2kplus2

2kplus2 bubbles detection

barmcakes

Ruby Scripting Utilitys

basespace-dojo

basespace-ninja

bayes_factors

A primer on bayesian inference

bc

Template for Software Carpentry bootcamp site repository.

bioinformatics

Tools for bioinformatics

bioruby-gngm

Identify causative mutations in a model genome from NGS reads using the NGM method.

bioruby-samtools

Porting of samtools-ruby to BioRuby. Binder of samtools for ruby, on the top of FFI -from original project-

bioruby-svgenes

SVG format genome browser style pictures

bioruby-synreport

biscap

Binomial SNP-caller from pileup

bsblast

Varied tools for parsing and printing pretty blasts from de-novo peptide sequencing

bubble-parse

Perl module for bubbleparse

bubbleparse

Classify and rank SNPs identified by cortex_con

candisnp

code for candiSNP web tool

crowdsrc

Generic and blank repository for holding crowdsourced genomics data

danmaclean.github.io

No Blog

danmaths

Some numerical methods I use fairly often

data_science

Data Science Course Handbook

data_science_tsl

Front Page For TSL internal training

databases

databases_colab

helpers for the databases course when run on colab

dna

My first repository on GitHub :D

dna2proteins

A Python script to translate DNA sequences to protein sequences

documents

HTML Documentation describing usage of Perl Modules

empty_repo

An example empty project repo

endomembranes

estimation_statistics

A short course on using Estimation Statistics

filesystools

set of methods for working with files and directories that I use often