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Daniel Lang's Projects

bedtools icon bedtools

A powerful toolset for genome arithmetic.

codebox icon codebox

This is repository is meant to share reusable tools I write

moss_dek1_grn_analysis icon moss_dek1_grn_analysis

Custom source code, workflows and jupyter notebooks used in the analysis of the moss Physcomitrium (Physcomitrella) patens' gene regulatory networks (GRN) to shed light into the role of the calpain DEK1 in plant development.

searchena2fastq icon searchena2fastq

Small Snakemake workflow to search the European Nucleotide Archive and download the corresponding FASTQs

transmembrane icon transmembrane

Workflow to annotate transmembrane topologies for a multi FASTA

whealbicode icon whealbicode

Custom source code, workflows and jupyter notebooks used in the analysis of the wheat genotypes sequenced in the Whealbi Project

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