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awesome-transformers-in-medical-imaging

A collection of resources on applications of Transformers in Medical Imaging.

bpgan

bronchinet

Airway segmentation from chest CTs using deep Convolutional Neural Networks

condition_ddim

conditional_ddpm

Official repo of a Medical Physics paper titled "CBCT-Based Synthetic CT Image Generation Using Conditional Denoising Diffusion Probabilistic Model"

ctgan

Conditional GAN for generating synthetic tabular data.

dataset

ddim

Denoising Diffusion Implicit Models

ddm

4D MRI 生成

deedsbcv

new and more efficient version for 3D discrete deformable registration, reaching the highest accuracy in several benchmarks

deep-learning-dose-prediction

diffma-diffusion-mamba

Soft Masked Mamba Diffusion Model for CT to MRI Conversion (Official PyTorch Implementation)

diffusemorph

diffusion-ddim-pytorch

This is a pytorch implementation of Denoising Diffusion Implicit Models

dpm-g4cpp

dpm-g4cpp is a C++ prototype of the Dose Planning Method (DPM): fast, accurate dose Monte Carlo simulation for photon, electron radiotherapy treatment planning. As a clean C++ implementation of the simulation, that doesn't contain any non-deterministic loops in the interaction sampling, it serves as a more suitable basis for GPU/FPGA implementation

egsnrc

Toolkit for Monte Carlo simulation of ionizing radiation — Trousse d'outils logiciels pour la simulation Monte Carlo du rayonnement ionisant

fast-ddpm

fastsearchlibrary

The multithreading library (.dll) that provides opportunity to fast find files or directories using different criteria.

g4hepem

Geant4 EM physics simulation R&D project looking for solutions to reduce the computing performance bottleneck experienced by HEP detector simulation applications.

geant4-beginner-course

generative_brain_controlnet

Repository to train ControlNet on Brain data (UK BIOBANK) using MONAI Generative Models

lapirn

Large Deformation Diffeomorphic Image Registration with Laplacian Pyramid Networks

matmulfreellm

Implementation for MatMul-free LM.

medicaldiffusion

Medical Diffusion: This repository contains the code to our paper Medical Diffusion: Denoising Diffusion Probabilistic Models for 3D Medical Image Synthesis

metrics

Example of evaluation metrics used in the SynthRAD2023 challenge

mis-fm

mr-to-pct

MR to CT for TUS acoustic simulations

open-kbp-opt

Develop plan optimization models for knowledge-based planning in radiotherapy

painter

Painter & SegGPT Series: Vision Foundation Models from BAAI

preprocessing

Preprocessing scripts: from dicom to aligned nitfy for SynthRAD2023 Grand Challenge