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anomalousdiffusionfilters

Repository to code and documentation of Anomalous Diffusion Filter Module (Insight-Journal)

anomalousfiltersextension

3D Slicer extension that provides several approaches in order to apply the anomalous spatial filters on medical images.

babybrain

A 3D Slicer extension for neonate/fetal brain analysis and segmentation

braintissuesextension

3D Slicer extension to segment different brain structures and tissues in MRI structural images.

cardiocsim

csim-toolkits.github.io

CSIM organization website page

imagecharacterizationextension

imagefeatureextraction

imagej

Repository for plugins, macros and scripts available to run in ImageJ.

itk

Repository to share codes implemented to run on ITK platform.

itkanomalousdiffusionfilters

Official repository to CSIM ITKAnomalousDiffusionFilters to ITK builds and remote repository

itkautomaticconductancecalculator

Official repository to Automatic Conductance Image Calculator to ITK Remote Module.

lesionspotlightextension

3D Slicer extension that provides T2-FLAIR MRI manipulation methods in order to increase contrast and segment hyperintense Multiple Sclerosis lesions

mrcardio

3D Slicer extension that provides a set of modules of segmentation, registration and cardiac images analysis

mslesiontrackextension

3D Slicer extension to segment Multiple Sclerosis lesions on DTI and Structural MRI images

opencl

Any application related to the practice of parallel computing using OPENCL

robexbrainextraction

3D Slicer extension to offer a brain extraction algorithm for MRI structural images. This extension has the ROBEX brain extraction implementation.

scripts

Simples scripts and codes that are useful to the daily basis routine in a computational laboratory.

slicer-lesionsimulatorextension

3D Slicer extension that provides a toolkit for Multiple Sclerosis lesion simulation in multimodal MRI images, such as T1, T2, T2-FLAIR and DTI scalar maps.

slicerbrainvolumerefinement

Extension for the Brain Volume Refinement methods (BVeR)

slicerdiffusioncomplexitymap

Slice module to offer the Diffusion Complexity Map algorithm

textureanalysisextension

Extension to extract Texture Features from MRI.

ticce

Tissue Characterization and Classification Extension for 3DSlicer