connectomicslab Goto Github PK

aneurysm_detection

This repository contains the code used for the paper "Towards automated brain aneurysm detection in TOF-MRA: open data, weak labels, and anatomical knowledge "

chimera

clabtoolkit

This repository contains a python package that includes useful tools for image processing.

cmp3-ohbm2020

Repo dedicated to resources for presenting connectome mapper 3 at OHBM 2020 Virtual Meeting

cmtklib-data

Datalad dataset that stores all data resources of the cmtklib module of Connectome Mapper 3 (https://github.com/connectomicslab/connectomemapper3).

connectome_spectral_analysis

Repository for paper https://authors.elsevier.com/sd/article/S1053-8119(21)00884-3

connectomemapper3

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, resting/state functional MRI, and recently EEG processing pipelines, from raw T1 / DWI / BOLD , and preprocessed EEG data to multi-resolution brain parcellation with corresponding connection matrices.

ds-sample-test1

ds-sample-test2

glioma_change_detection_t2w

glioma_nlp

This repository contains the code used for the paper:"Diagnostic surveillance of high-grade gliomas: towards automated change detection using radiology report classification"

hcp-behavioral-domains

This is the repository to store the analysis code for the paper "Exploring the Latent Structure of Behavior Using the Human Connectome Project’s Data".

hcp2bids

To convert Human Connectome projects(HCP) data to BIDS std

indivbrainparcel

Python package to parcellate the human brain using the Lausanne multi-scale cortical atlas and the thalamic nuclei atlas developed in the Connectomics and MIAL labs respectively

probconnatlas