conchoecia Goto Github PK
Name: darrin t schultz
Type: User
Company: University of Vienna
Bio: PhD from UC Santa Cruz Bioinformatics Department. Genome Assembly. Marine Invertebrates. Evolution.
Twitter: conchoecia
Location: Vienna, Austria
Name: darrin t schultz
Type: User
Company: University of Vienna
Bio: PhD from UC Santa Cruz Bioinformatics Department. Genome Assembly. Marine Invertebrates. Evolution.
Twitter: conchoecia
Location: Vienna, Austria
Data related to the Beroe forskalii mitogenome manuscript.
BWK awk modified for biological data
Tutorials on common bioinformatics skills for beginners
A program to easily take spectra with Ocean Optics spectrometers. It's a breeze to use.
Calculate Heterozygosity with Pileup
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CUTTlery: Codon Usage Table Tools and Bayesian determination of ORF protein coding-ness.
Test website for GLO
Development notes for bioinformatics and other things.
dotplot + genome browser figure generator for genome assembly
Files used in customizing emacs
Subset of fast5 files contained in a fastq, BAM, or SAM file.
standalone fasta_stats from Meraculous
what is the fastest way to get the reverse complement of a DNA string in python
A collection of snakemake scripts to streamline genome annotation
genomes of luminous organisms toolkit
genome size estimation rarefaction
Het De Bruijn graph - for finding heterozygous genome regions in k-mer space.
Hormiphora californensis genome annotation and supplemental materials related to the genome assembly.
This pipeline trims HiSeq shotgun, Dovetail Chicago, and HiC data.
Generate a summary spreadsheet for genomes from NCBI.
A script that QCs and plots how many chromosome-scale genomes are on NCBI
website for Northern California Computational Biology group
This repository contains analyses required to recreate the analyses found in Schultz, Kotlobay, et al. 2018
oxford dot plots
Pauvre: QC and genome browser plotting Oxford Nanopore and PacBio long reads.
specifications for the rbh file formats used by the odp software.
Yet another bulk transcriptome assembly pipeline
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.