Comments (2)
Okay we have an open task (#10) to process the clinical matrix dataset. We won't be able to provide much more information to the django team until we make progress on that task.
from cancer-data.
The sample attribute information is now available in data/samples.tsv
. The frontend is probably interested in every variable besides maybe patient_id
.
from cancer-data.
Related Issues (20)
- Process the clinical matrix to extract sample attributes HOT 10
- exploring the data HOT 3
- Variable documentation for Xena Browser's PANCAN_clinicalMatrix HOT 8
- Extract detailed mutation information for TCGA samples HOT 2
- Current Xena PANCAN_mutation dataset is missing some samples and variables from a previous release HOT 12
- Generate comprehensive comparisons between RNAseq, Mutation, and Clinical Matrix HOT 2
- Precomputing a sample × mutation-in-gene-set matrix HOT 7
- Export a gene information table HOT 1
- Acronyms for diseases HOT 8
- Reshape mutation matrix for use by core-service repository HOT 3
- Invalid gene in mutation-matrix.tsv.bz2 on figshare v5 HOT 1
- Recurrence and Distant Metastasis HOT 1
- Much Richer Sample Clinical Data HOT 9
- Treehouse Childhood Cancer Initiative HOT 5
- TCGA PanCanAtlas Paper/Data Release HOT 12
- Filtering samples is (potentially) too strict HOT 22
- Retain Metastatic Tumors HOT 6
- Converting Xena datasets to standard identifiers rather than gene symbols HOT 7
- Persistent storage of matrices that enables quick indexed lookup HOT 4
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from cancer-data.