christophkirst Goto Github PK

aid

Artificial neuronal networks supporting music performance

celegansbehaviour

Analysis tools for long term C. Elegans Behaviour

celeganslongtermbehavioralanalysis

Scripts to analyse the long term behavior of C.Elegans

celltracker

clearmap

ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.

clearmap2

ClearMap 2.0 with WobblyStitcher, TubeMap and CellMap

clearmap2documentation

ClearMap 2.0 Documentation

clearmapunstable

ClearMap's repository for most recent unstable version, use stable ClearMap repository

cmmfile

Exchange binary files between C++, Mathematica and Matlab

deeplabcut

Markerless pose estimation of user-defined features with deep learning for all animals

elastix

ClearMap elastix repository

forcelearning

FORCE learning implementation

katemathematica

Mathematica Syntax Highlighting for Kate

pyvista

3D plotting and mesh analysis through a streamlined interface for the Visualization Toolkit (VTK)

replay_trajectory_classification

Identify whether replays are fragmented, continuous, or stationary.

repotracker

Tracks activity on github repositories

simkernel

SimKernel controls parameter scans and iterations for any given C++ code

spikedecoding

Project for brain state sensitive spike decoding

stemcelltracker

Tool to Segment and Track Stem Cells in 3D

stemcelltrackerimages

Exmapl images for the StemCellTracker

templatecreator

C++ to Heka Patchmaster Interface and GUI for self-designed stimuli and online analysis

test

Tests

testsubmodule

Submodul test

tracker

Tracks Cells

ucsf-vpn

Linux command-line client to manage a UCSF VPN connection

vispy

Main repository for Vispy

website-examples

👨🏻‍💻 All code examples embedded on my website https://jmswrnr.com