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Chris Knoll's Projects

atlas icon atlas

ATLAS is an open source software tool for researchers to conduct scientific analyses on standardized observational data

calypso icon calypso

CALYPSO (Criteria Assessment Logic for Your Population Study in Observational data) is a web user interface to define, instantiate and evaluate a study population and the implications of inclusion criteria

cdmtests icon cdmtests

A repository to store CDM testing from different CDM vendors.

circe icon circe

[Under development] CIRCE is a cohort definition and syntax compiler tool for OMOP CDMv5

cohortmanager icon cohortmanager

An R tool that lets you manage cohort definitions sourced from CSVs

cohortmethod icon cohortmethod

An R package for performing new-user cohort studies in an observational database in the OMOP Common Data Model.

cyclops icon cyclops

Cyclops (Cyclic coordinate descent for logistic, Poisson and survival analysis) is an R package for performing large scale regularized regressions.

d3 icon d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

featureextraction icon featureextraction

An R package for generating features (covariates) for a cohort using data in the Common Data Model.

hydra icon hydra

An R package and Java library for hydrating package skeletons into executable R study packages based on specifications in JSON format.

knockout icon knockout

Knockout makes it easier to create rich, responsive UIs with JavaScript

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