Comments (1)
"--const-fid 0" is probably the simplest way; it causes all family IDs to be set to "0", and individual IDs to be set to the ID in the VCF file. (The default behavior is to treat '_' as a delimiter between the FID and IID; this obviously has a problem with multiple underscores.)
I will modify the error message to suggest --const-fid as a workaround.
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Related Issues (20)
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