chiffa Goto Github PK

academic_semantic_reader-writer

A reader/writer for semantically enriched publications for better reading/writing.

alife2023_goea-sgd

Complementary material and code for the ALIFE 2023 paper "Evolutionary Algorithms in the light of SGD: limit equivalence, minima flatness and fine-tuning"

bioflow

Information Flow Analysis toolkit for biological networks

chiffa_area51

A set of projects in development

chiffatools

A handy set of snippets for computational biologists and other scientist in Python

chiffatools2

A set of compact tools in Python

chromo_vision

chromosome_counter

A simple tool to count chromosomes in the metaphase spreads for mouse and human cells. Allows for manual edition of the segmentation afterwards

ensembl_gene_locations

A view of Ensemble transcripts that maps Ensemble & Uniprot IDs to chromosomes and locations for several organisms

epi_interventions_illustrations

Epidemiological interventions illustrations engine

gan_evo

Eco-Evo on GAN/Disc pairs

genenetworkstructure

Accompanying code for El Mahdi, Kucharavy et al.

general_adaptability_model

graphalchemy

GraphAlchemy - No more magic. A Python OGM that makes you stay in control.

graphscan

Playing around with dependency and supply graphs

handy_toolbox_py

A set of usefull tools in python

haskell_playground

Snippets of code in Haskell

ibis2d

idopython

Snippets of improved python code

image_pipe

Pipeline building solution for 4D biological microscopy

imaris_converter

intermediate_python_programming

Container for the exercices of the intermediate Python course

internet_status_control

karyotype_retriever

Chromosome-level and local ploidy loss or gain estimation.

llm_playground_cyril

A quick and easy way to interact with open-source LLMs.

marineadvisorychecker

medhacks

MedHacks Hackathon repsitory

mini_rna_seq_filter

Small series of statistical tests to play with RNA_seq data

neo4j-community-1.9.6

neo4jdemo