Process fail - Core dump about hifiasm HOT 9 OPEN

Could you have a try with current HEAD (r593)? If it still doesn't work, could you please share the bin files with us? Thanks in advance.

from hifiasm.

Hi, thank you so much for the quick reply!
The version I used was r593, but downloaded on April 26. Do you suggest to try with the version available today even if the version number didn't change?

from hifiasm.

I see. Could you please share the bin files with us? It should be a small bug and we would be able to fix it soon.

from hifiasm.

Sure, I will share it with you through the email in your profile ([email protected]), ok?

from hifiasm.

Hi!
Did you receive the bin files and had a chance to download it?
Thanks in advance!

from hifiasm.

Sorry for the delay. I'm trying to fix it this week and will let you know as soon as possible.

from hifiasm.

Could you please have a try with the latest release (0.19.6-r595)?

from hifiasm.

Hi, thank you so much!
I tried with the latest release and it worked!

I am testing the assemblies using diferent sets of Nanopore read lenght to compare, and I have one assembly with the previous release (r593). In this case, do you recomend me to rerun the assembly generated with the previous version (r593)? I mean, were there substantial changes between the r593 and r595 that makes assemblies from different versions not comparable?

Thank you!

from hifiasm.

It won't have too much differencce. But the new release has --ul-cut to internally filter out short UL reads, which might be helpful for your testing.

from hifiasm.