chenlingantelope Goto Github PK
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chenlingantelope's Projects
affinitymaturation
cell-ontology
An ontology of cell types
cellontology
clustering_eval
csea
CSEA method reproducibility
harmonizationscanvi
Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper
msscrnaseq2019
Analysis for 2019 submission "Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis" Schafflick1, Xu, Hartlehnert1 et. al
onclass
Single cell typing based on cell ontology
overgenes
Search for overlapping coding genes for pairs of protein sequences
scrnaseq_benchmark
Bench-marking classification tools for scRNA-seq data
scvi_tsp
scVI and scANVI modified for classification with cell ontology and symmetrical KL for the Tabula Sapiens project
singlecellopenproblems
Formalizing and benchmarking open problems in single-cell genomics
yoseflab.github.io
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