cecileane Goto Github PK

algebraofgraphics.jl

Combine ingredients for a plot

ane-group-guidelines-expectations

cecileane.github.io

personal github website

computingtools

course website: computing tools for data analytics

discovery-hiring-analyst-2016

Task description and data for candidates applying to be a Data Analyst in the Discovery department at Wikimedia Foundation.

documenter.jl

A documentation generator for Julia.

github-classroom-for-teachers

hybrid-lambda

Hybrid-Lambda is a software package that can simulate gene trees within a rooted species network or a rooted species tree under the Kingman's coalescent or Lambda coalescent process.

hybridlambdabuilder

ibpp

Bayesian species delimitation integrating genes and traits

l1ou

Detection of evolutionary shifts in Ornstein-Uhlenbeck models

mass_clone

This is a shell script that will clone multiple repositories. The intended usage is for GitHub Classroom to be able to clone all repos of a certain assignment. The script will create a folder based on the identifier(assignment name) then make folders for each repo then clone. Uses GitHub api v3, curl 7.49.1 and grep 2.5.1

metadata.jl

Metadata for registered Julia packages.

metagraphsnext.jl

A package for graphs with vertex labels and metadata in Julia

networkpcm-workshop

workshop on phylogenetic comparative methods on networks, July 2023

phylocoalsimulations.jl

phylogaussianbeliefprop.jl

analysis of Gaussian models on phylogenetic networks using belief propagation (aka message passing)

phylolm

phyloplots.jl

Display utilities for phylogenetic trees and networks

quartetnetworkgoodnessfit.jl

julia package for test of phylogenetic networks

s_alata_microdistribution

simplexgraphs

R code to draw simplex graphs

simulation-anomalous-4taxnet-prevalence

Simulation to quantify the prevalence of anomalous 4-taxon networks

simulation-ratevariation

Simulations of gene trees with rate variation

test-for-snaq-by-reduced-data-sample

Basic use and test of software SNAQ! applying to the reduced genetic trees data sample.

ticr

pipeline for highly parallelized concordance analyses on very long alignments, and TICR test

traitevooushift

research project with Sabrina

trees.jl

example Julia package

uw-sgsa-website

The official repository for the UW SGSA website:

wgd-analysis