Related Issues (20)
- wrong url for release download in quick install HOT 2
- Running with tutorial dataset giving all empty file HOT 6
- Getting snake error HOT 23
- please document haploclique.extra_parameters HOT 3
- SARS-CoV-2 workflow comparison - kindly check if your work is represented correctly HOT 1
- Warning: All reads at position 4045 in the same reverse orientation ? HOT 1
- Conflict in quality_assurance.smk with custom datadir-path
- frameshift_deletion_checks, simBench & Haplotype callers HOT 6
- [UX issue] unknown keywords in config file HOT 1
- [UX issue] multiple GFF HOT 1
- predicthaplo does not work on sars-cov-2 tutorial HOT 1
- hiv-tutorial works with haploclique, but fails with predicthaplo
- hiv-tutorial fails with haplotype_reconstruction: savage, and SAVAGE command output is dumped into terminal instead of log
- Error in rule hmm_align: HIV in Vpipe HOT 2
- Missing input files for rule generate_web_visualization
- vpipe broken? ModuleNotFoundError: No module named 'pandas' HOT 2
- Activating snv in sars tutorial leads to error HOT 2
- Snakemake dry run 404 HOT 9
- Problem in the deconvolution step HOT 4
- Snakemake standardized usage
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