Related Issues (20)
- add sequence database search Pipeline, with parallel support HOT 1
- "documentation engine" interface tutorial
- conclusion document HOT 1
- address API doc build warnings
- add funding acknowledgements
- configure external links to open in a new tab
- stop hosting at https://cap-lab.bio/developing-with-qiime2
- add how-to on distributing a plugin HOT 1
- clarify that "derivative works" of the template plugin are allowed, which is different than the license of the book itself
- review all API reference sections to confirm that the APIs that we want in each are referenced
- link to the q2-dwq2 repo at the beginning of the plugin development tutorial, so the reader can/try see the final product
- logo background color is slightly off in dark mode - fix to match background
- add help text and usage examples for all artifact classes and formats in `q2-types`
- create plugin actions that wrap functionality written in R HOT 1
- DRY: figure out how to not duplicate code between the q2-dwq2 plugin and the plugin tutorial
- when to raise an error versus when to `warnings.warn` HOT 1
- add plugin explanation on structure of q2-types and how that avoid circular imports
- add tip for using --no-recycle flag when developing pipelines.
- integrate metadata in tabulate-las-results
- Minor suggestions from using automate-testing and facilitate-installation
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