Problem with solo - PyTorch Lightning about solo HOT 4 CLOSED

Hi all, I'm not familiar with pytorch lightning. We developed Solo for vanilla pytorch. I'll put this on my queue to look into, but I can't promise a quick fix. You might look into whether the scVI developers have their codebase working for pytorch lightning. Otherwise, I'd recommend a clean anaconda install without pytorch lightning.

from solo.

hi，I have meet the same problem too，I try downgrade torchmetrics version pip uninstall torchmetrics==0.9.3 & pip install torchmetrics==0.6.0， then it works

from solo.

hi，I have meet the same problem too，I try downgrade torchmetrics version pip uninstall torchmetrics==0.9.3 & pip install torchmetrics==0.6.0， then it works

Sadly, it didn't work, I'm getting a different error related to other libraries:

Traceback (most recent call last): File "/opt/anaconda3/envs/demul/bin/solo", line 5, in <module> from solo.solo import main File "/opt/anaconda3/envs/demul/lib/python3.9/site-packages/solo/solo.py", line 15, in <module> from pytorch_lightning.callbacks.early_stopping import EarlyStopping File "/opt/anaconda3/envs/demul/lib/python3.9/site-packages/pytorch_lightning/__init__.py", line 34, in <module> from pytorch_lightning.callbacks import Callback # noqa: E402 File "/opt/anaconda3/envs/demul/lib/python3.9/site-packages/pytorch_lightning/callbacks/__init__.py", line 25, in <module> from pytorch_lightning.callbacks.progress import ProgressBarBase, RichProgressBar, TQDMProgressBar File "/opt/anaconda3/envs/demul/lib/python3.9/site-packages/pytorch_lightning/callbacks/progress/__init__.py", line 22, in <module> from pytorch_lightning.callbacks.progress.rich_progress import RichProgressBar # noqa: F401 File "/opt/anaconda3/envs/demul/lib/python3.9/site-packages/pytorch_lightning/callbacks/progress/rich_progress.py", line 26, in <module> _RICH_AVAILABLE: bool = _package_available("rich") and _compare_version("rich", operator.ge, "10.2.2") File "/opt/anaconda3/envs/demul/lib/python3.9/site-packages/torchmetrics/utilities/imports.py", line 54, in _compare_version pkg_version = pkg.__version__ # type: ignore AttributeError: module 'rich' has no attribute '__version__'

from solo.

Hi all, I'm not familiar with pytorch lightning. We developed Solo for vanilla pytorch. I'll put this on my queue to look into, but I can't promise a quick fix. You might look into whether the scVI developers have their codebase working for pytorch lightning. Otherwise, I'd recommend a clean anaconda install without pytorch lightning.

Thank you very much, the version from scVI is working in line.

from solo.