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3d-force-graph

3D force-directed graph component using ThreeJS/WebGL

adversarial-validation

Creating a better validation set when test examples differ from training examples

aml-days-tda-tutorial

basecalling

CS 273b Project

bctpy

brain connectivity toolbox for python

brain-networks-course

Repo for Brain Networks course

caffeine-mapper

calebgeniesse.github.io

cayman

Cayman is a Jekyll theme for GitHub Pages

characterizing-pinns-failure-modes

Characterizing possible failure modes in physics-informed neural networks.

cogspaces

Leveraging multiple fMRI studies to predict cognitive states from brain maps.

courses

dash-tsne

Dash Demo App - Interactive t-SNE Explorer

decorated-merge-trees

Tools for generating and comparing Decorated Merge Trees, enriched persistence-based topological data descriptors.

deep-fmri

Deep fMRI

deepchem

Deep-learning models for Drug Discovery and Quantum Chemistry

deepchem-gui

A simple web GUI for DeepChem

dnn-mode-connectivity

Mode Connectivity and Fast Geometric Ensembles in PyTorch

generalization_metrics_for_nlp

giotto-deep

Deep learning made topological.

grapher

WebGL/Canvas Network Graphs

hypertools

A Python toolbox for gaining geometric insights into high-dimensional data

jsnetworkx

Build, process and analyze graphs in JavaScript (port of NetworkX)

kepler-mapper

Kepler Mapper: A flexible Python implementation of the Mapper algorithm.

kepler-mapper-backend-example

Demonstration of how to use Kepler Mapper as backend.

landmark_cover

A landmark-based cover for KeplerMapper

largevis

loss_landscape_taxonomy

[NeurIPS 2021] code for "Taxonomizing local versus global structure in neural network loss landscapes" https://arxiv.org/abs/2107.11228

mapper_comparison

Code for paper Mapper Comparison with Wasserstein Metrics

mmtda

Code for paper "A topological data analysis based classification method for multiple measurements"