bwubb Goto Github PK
Name: Brad Wubbenhorst
Type: User
Company: University of Pennsylvania
Bio: Chief Bioinformatician for the Nathanson Lab at the University of Pennsylvania Perelman School of Medicine.
Location: Philadelphia
Brad Wubbenhorst's Projects
bios635
BIOS 635 Introduction to Machine Learning
codex2
Full-spectrum copy number variation detection by high-throughput DNA sequencing
dnapy
germline
Collection of scripts for germline sequencing.
hiplexpipe
hla
xHLA: Fast and accurate HLA typing from short read sequence data
hrdex
lohhla
A manual fork of lohhla
paired-somatic
Collection of code for a paired somatic variant calling pipeline.
pdx
regenotype_ngs
NGS pipeline developed with Snakemake for re-calling variants from BAM files using GATK 4.1.0.0 and weCall.
rexamples
R examples in Colab
sequence_db
tecac
utils
wecall
Fast, accurate and simple to use command line tool for variant detection in NGS data.
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