Comments (2)
Hi @ParitoshP702,
Thank you for your interest in Tangram!
Now coming to the issue, I have a couple questions for you which will help me better understand how I can help you solve it:
-
How did you install tangram? I would recommend
pip install tangram-sc
. Could you also check if you have tangram (not tangram-sc) package installed? In that case, I would uninstall that package aspip uninstall tangram
. -
What version of tangram have you installed? you can check it this way:
import tangram as tg
print(tg.__version__)
Let me know if 1. works for you! If not, I'll be happy to help further.
from tangram.
That worked for me , thnx a lot
from tangram.
Related Issues (20)
- Can we have an API as batch size for the integration method? HOT 3
- Possible to use multiple single cell datasets in Tangram? HOT 3
- Cannot find correspondence of the input data HOT 1
- question about training genes HOT 1
- Some questions about best practices HOT 1
- Attribute error : module 'tangram' has no attribute 'map_cells_to_space' HOT 2
- scRNAseq cells < spatial cells, curious about how mapping works HOT 3
- Unexpected behaviour HOT 1
- Question about acceptable AUC, improving AUC HOT 1
- potential overfitting HOT 5
- Interpretation of tangram_ct_pred HOT 2
- Option "enforce gene lowercase" HOT 1
- error when sq.im.segment
- Tangram Deconvolution HOT 1
- Using Integrated single cell data for alignment
- AttributeError: module 'tangram' has no attribute 'pp_adatas'
- Sparsity_sc and sparsity_sp = 0
- Please explain `project_cell_annotations`
- Projecting spatial annotations to single cell HOT 2
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