brentlab Goto Github PK
Name: Brent Lab
Type: Organization
Location: Washington University in St. Louis
Blog: http://mblab.wustl.edu/
Name: Brent Lab
Type: Organization
Location: Washington University in St. Louis
Blog: http://mblab.wustl.edu/
A variant calling workflow suitable for both checking genotypes and processing data for BSA experiments
Dual threshold optimization for identifying convergent evidence: TF binding locations and TF perturbation responses.
Eval is a flexible tool for analyzing the performance of gene-structure prediction programs.
Gene Regulatory Network Evaluation Using Gene Ontology
network evaluation package
A “data light” TF-network mapping algorithm using only gene expression and genome sequence data.
N-SCAN is a suite of software for gene-structure prediction. N-SCAN is available for human and Drosophila (fruitfly).
PPFINDER is a Perl-based procedure for finding processed pseudogenes in genome annotations (GTF format). PPFINDER identifies pseudogenes using two different methods, and creates a GTF file with pseudogene coordinates that can be used for masking the genome sequence.
Documentation for all organisms with active databases
Front end for the RNASeq metadata database(s)
Predict genes' response to perturbations and explains which genomic factors determine the response predictions.
Trace Recalling is a novel method for deconvoluting double traces that result from simultaneously sequencing two DNA templates. Trace Recalling identifies up to two bases at each position of such a trace.
Twinscan is a suite of software for gene-structure prediction. Twinscan is currently available for Mammals, Caenorhabditis (worm), Dicot plants, and Cryptococci.
A Django managed shiny app for storing and visualizing Yeast Calling Cards data
Shiny front end to yeastCallingCardsDB
A development environment to explore implementations of deep neural networks for predicting the relationship between transcription factor and target genes using binding and perturbation data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.