Comments (7)
From twitter:
We can round up a couple of very close PRs / minor bug fixes and then start the release process today / tomorrow targeting a release early this week. I had been thinking it might be nice to wait for the io-plugin PR 937 to go in, but fine for that to wait for 0.2.13.
— Nicholas Sofroniew (@sofroniewn) February 23, 2020
Looks like we can fix this by waiting, and then pinning napari>=0.2.12
when it's released.
from cellfinder.
@adamltyson we have now generated a new release candidate 0.2.12rc0
which can be tested with pip install --pre napari
or pip install -U --pre napari
for an upgrade. If you can give it a test and let us know if it works for you that would be great. We're doing some testing right now and I imagine I will make the release tonight
from cellfinder.
@sofroniewn all my napari-based viewers work as expected, and napari/napari#932 is fixed.
Thanks!
from cellfinder.
Great, thanks!
from cellfinder.
0.2.12
is out - sorry it took a little longer. I'll tweet about it tomorrow, but release notes are here https://github.com/napari/napari/releases/tag/v0.2.12
from cellfinder.
Great, thanks @sofroniewn!
from cellfinder.
Fixed in e90fd69
from cellfinder.
Related Issues (20)
- Update to Python 3.11
- Update cell classification network HOT 1
- Save models into e.g. `.brainglobe/cellfinder/models`
- Update the sample data
- [Feature] Allow the user to select points from more than one layer at once in the curation interface HOT 2
- [Feature] Warn the user when overwriting training data in the curation interface
- [Feature] Add keyboard shortcuts to the curation interface
- [BUG] CI breaks with pytest v8.0.0 HOT 1
- [BUG] Multiprocessing threading causing timeouts HOT 7
- [BUG] Inappropriate handling of unsigned integer data types HOT 1
- [Feature] Use uint16 for cell candidate detection when signal_array is small, to save memory HOT 3
- [Feature] Refactor so THRESHOLD and SOMA_CENTRE_VALUE are defined in one place
- Analysis csv output does not include data about all cells classified
- Downloading the trained model crashes if the model directory already exists
- [Feature] Benchmark napari versus brainmapper code
- [BUG] Writing custom config is not possible on HPC with shared installation of BrainGlobe
- [BUG] Intermittent Segmentation Faults on CI HOT 14
- Move data loading code to `brainglobe_utils.image_io.load`
- [BUG] Cellfinder seems to get stuck on structure splitting in some situations? HOT 4
- Investigate why there's a transpose operation that cannot be removed. HOT 8
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.
from cellfinder.