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brainpy

BrainPy: A general platform for computational neuroscience and brain-inspired computation

chatgpt-next-web

A cross-platform ChatGPT/Gemini UI (Web / PWA / Linux / Win / MacOS). 一键拥有你自己的跨平台 ChatGPT/Gemini 应用。

codefor2018sciencepaper

This is the repo for the 2018 Science paper

deepfake

DeepFake on any platform (Mac, Linux tested)

deeptrack

denglab.github.io

This repo stores the files in Wulan Deng's lab website. Currently test only.

fisik

Framework for the Inference of in Situ Interaction Kinetics from single-molecule imaging data with sub-stoichiometric labeling.

hello-world

First trial

homemade-machine-learning

🤖 Python examples of popular machine learning algorithms with interactive Jupyter demos and math being explained

monte-carlo-simulation-recipes

Recipes of Monte Carlo simulations in Fieremans and Lee, NeuroImage 2018

motion-etr

open-source-rover

A build-it-yourself, 6-wheel rover based on the rovers on Mars!

pl_hagerlab

Matlab scripts to analyze SMT dwell times. "Power-law behaviour of transcription factor dynamics at the single-molecule level implies a continuum affinity model"

python-programming-exercises

100+ Python challenging programming exercises

qsr

A software package for quantitative analysis of single molecule localization microscopy data in live and fixed cells.

rtl8188eu

Repository for stand-alone RTL8188EU driver.

slimfast_gui_zw

This is a project to debug, modify, and upgrade the SLIMfast_GUI code originally developed by Christian Richter. The original code was adopted from https://gitlab.com/tjian-darzacq-lab/SPT_LocAndTrack, thanks to the share of Anders Sejr Hansen.

sojourner

Statistical analysis of single molecule trajectories. (NB: The Sojourner.Pro featuring machine learning analysis is in the making, sign up on sojourner website for release: also, I am open for freelancing till the end of the pandemic, checkout the website for details).

solomon-breckon-book

Fundamentals of Digital Image Processing: A Practical Approach with Examples in Matlab - Solomon / Breckon, 2010

tutorials

CellProfiler tutorial pipelines and images

u-track

Multiple-particle tracking designed to (1) track dense particle fields, (2) close gaps in particle trajectories resulting from detection failure, and (3) capture particle merging and splitting events resulting from occlusion or genuine aggregation and dissociation events

u2os-chip-seq-

vundle.vim

Vundle, the plug-in manager for Vim