bodington Goto Github PK

aberdown

An updated R Markdown thesis template using the bookdown package

aiyprojects-raspbian

Source code for the AIYProjects "Voice Kit"

amoa_miseq_sequencing

Existing tools based ‘assembly pipeline’ and ‘gap pipeline’ for paired-end MiSeq Illumina reads

basta

Basic Sequence Taxonomy Annotator

bodington.github.io

dadasnake

Amplicon sequencing workflow heavily using DADA2 and implemented in snakemake

entrez_qiime

A utility to generate input files for taxonomy assignment in QIIME from the NCBI database

github-repository-template

Template for setting up a new GitHub repository

idba

linking-16s-to-amoa-taxonomy

metamos

A metagenomic and isolate assembly and analysis pipeline built with AMOS

phyloniche

Some tools for calculating niche specificity using phyloseq objects.

phyloseq.mate

Various helper functions for working with phyloseq.

posterdown

Use RMarkdown to generate PDF Conference Posters via HTML

public

My stuff

tome

A machine learning model for the prediction of optimal growth temperature of microorganisms and enzyme catalytic optima

trimgalore

A wrapper around Cutadapt and FastQC to consistently apply adapter and quality trimming to FastQ files, with extra functionality for RRBS data

zotero-android

Zotero for Android