bionlp-hzau Goto Github PK

2021spring_crf_agactask1

84cancers

ad-litpathonet

Text-mined knowledgebase for AD pathology mechanism investigation

alzheimer_disease

bert-crf-for-bionlp-ost2019-agac-task1

AGAC-BioNL-OST2009-Task1 BERT+CRF (Ongoing)

bert-for-bionlp-ost2019-agac-task2

BERT-for-BioNLP-OST2019-AGAC-Task2

bionlp-corpus

Repository used to collect biomedical corpus on the Internet!

bionlp-hzau.github.io

blah8-llm-for-rice-gare

Bioregulatory Event Extraction using Large Language Models: A Case Study of Rice Literature

cancer-alterome

Cancer-Alterome is a comprehensive and curated dataset that focuses on the investigation of regulatory events caused by gene alteration in the context of cancer.

dggat

embedding-experiment-in-bionlp-course

Embedding experiment in BioNLP course

emfas

Evidence-augmented Generative Model with Fine-grained weAk Labels (EMFAS) Model for Gene-Disease Association Discovery

enrricetrait

Rice Trait Enrichment

gene-function-disease-repository

gene_disease_network

jdhmt

JDHMT:

lstm_crf_useagac

maximumentroy4classification

Teaching codes for ME

pheseq

PheSeq, A Bayesian Deep Learning Model to Enhance and Interpret the Gene Disease Association Studies

rice-trait-ontology

Rice Trait Ontology (RTO)

ricetraitontology

Trait Ontology Mapping

tutorial-4-nltk-basic

tutorial4dependencytree

Tutorial_4_Dependency_tree

tutorial4hpoenrichment

tutorial4wordcloud-basic

Tutorial for WordCloud

tutorial_4_crf

This is a tutorial for the usage of Wapiti which works for CRF implementation. The tutorial is prepared by @KaiyinZhou.

tutorial_4_go_enrichment

tutorial_4_tfidf

tutorial_4_word2vec

Tutorial for word2vec coding.