bioermaf Goto Github PK

absolut

Unconstrained lattice antibody-antigen bindings generator

antibody_binding_predictor

bio-transformers

bio-transformers is a wrapper on top of the ESM/Protbert model, trained on millions on proteins and used to predict embeddings.

bio_embeddings

Get protein embeddings from protein sequences

chatgpt

Use ChatGPT API without authentication in +130 languages!

colabdesign

Making Protein Design accessible to all via Google Colab!

d-script

A structure-aware interpretable deep learning model for sequence-based prediction of protein-protein interactions

diffab

✌🏻 Antigen-Specific Antibody Design and Optimization with Diffusion-Based Generative Models for Protein Structures (NeurIPS 2022)

diffdock-pp

Implementation of DiffDock-PP: Rigid Protein-Protein Docking with Diffusion Models in PyTorch (ICLR 2023 - MLDD Workshop)

drug_data_for_ml

Therapeutics Data Commons: Artificial Intelligence Foundation for Therapeutic Science

dsressol

DSResSol: A sequence-based solubility predictor created with Dilated Squeeze Excitation Residual Networks

efficient-evolution

Efficient evolution from protein language models

equidock_public

EquiDock: geometric deep learning for fast rigid 3D protein-protein docking

equifold

Official code repository for EquiFold

esm

Evolutionary Scale Modeling (esm): Pretrained language models for proteins

gvp-pytorch

Geometric Vector Perceptrons --- a rotation-equivariant GNN for learning from biomolecular structure

igfold

Fast, accurate antibody structure prediction from deep learning on massive set of natural antibodies

immunebuilder

Predict the structure of immune receptor proteins

lama-cleaner

Image inpainting tool powered by SOTA AI Model

live

✯ 一个国内可直连的直播源分享项目 ✯ 🔕 永久免费 直连访问 完整开源 不含广告 完善的台标 直播源支持IPv4/IPv6双栈访问 🔕

localcolabfold

ColabFold on your local PC

nanonet

paddlehelix

Bio-Computing Platform Featuring Large-Scale Representation Learning and Multi-Task Deep Learning “螺旋桨”生物计算工具集

parasim

project-based-learning

Curated list of project-based tutorials

prottrans

ProtTrans is providing state of the art pretrained language models for proteins. ProtTrans was trained on thousands of GPUs from Summit and hundreds of Google TPUs using Transformers Models.

pubmed_parser

:clipboard: A Python Parser for PubMed Open-Access XML Subset and MEDLINE XML Dataset

pymolfold

Protein folding in Pymol

termux-alpine

Bash script for installing Alpine Linux in Termux - 100 MB.

unlocking-de-novo-antibody-design