Comments (2)
Identifiers.org is a great resource but many of the regexps are overly permissive or don't handle all the special cases. For example, the mouse strain identifier prefixes are not valid according to the Identifiers.org Ensembl entry (e.g. MGP_CAROLIEiJ_G0022789).
I added several genomic identifier schemes to the https://github.com/inveniosoftware/idutils package, including regexps and url resolvers. Some of these were based on Identifiers.org but most were created using each databases's documentation. Maybe this would be useful to import into bioutils/accession.py
?
We can certainly add more schemes to idutils. So far I've only implemented the ones that were relevant to a particular project.
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