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Benjamin Haibe-Kains's Projects

bcmeta_old icon bcmeta_old

Meta-analysis of breast cancer gene expression and clinical data

drugnetx icon drugnetx

Machine learning approach to build gene interaction networks characteristic of drug resistance and sensitivity

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Study of the role of classification complexity on the performance of classification algorithms using Gabriel graphs

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The code we use to render README.your_favorite_markup

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Script to download and curate breast cancer datasets from InSilicoDB

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Network inference from multiple datasets

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Probabilistic gene signatures

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Public data resources and Bioconductor: The goal of this workshop is to introduce Bioconductor packages for finding, accessing, and using large-scale public data resources including the Gene Expression Omnibus GEO, Sequence Read Archive SRA, the Genomic Data Commons GDC, and Bioconductor-hosted curated data resources for metagenomics, pharmacogenomics PharmacoDB, and The Cancer Genome Atlas.

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Development of a subtype classifier using top scoring pairs

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