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hewm2008@bgi's Projects

bamcoverage icon bamcoverage

BamCoverage: A efficient software tools to calculate every site depth of genome based bam files

bamdeal icon bamdeal

BamDeal: a comprehensive toolkit for bam manipulation

bamsplit icon bamsplit

A efficient software tools to split Bam form all chromosome together to each chr one bam

fqcheck icon fqcheck

fqcheck: A new simple and efficient software to stat base and quality distribution of fq file

fxtools icon fxtools

FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation

gcapda icon gcapda

gamete cell assisted chromosome-scale phased diploid assembler

ldblockshow icon ldblockshow

LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files

poplddecay icon poplddecay

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files

rectchr icon rectchr

Multi-level visualization of genomic statistical variables on rectangular chromosomes

reseqtools icon reseqtools

A Toolkit for analyzing next-generation DNA Re-Sequencing data

rrselection icon rrselection

RRSelection: A linkage disequilibrium method to detect selection region across population VCF

soap2bam icon soap2bam

soap2bam: A efficient software tools to convert soap to bam format

soapnewcov icon soapnewcov

SoapNewCov: A efficient software tools to Calculate site depth of genome based soap

vcf2dis icon vcf2dis

VCF2Dis: A new simple and efficient software to calculate p-distance matrix based Variant Call Format

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