benjaminirving Goto Github PK
Name: Benjamin Irving
Type: User
Bio: Researcher in healthcare and machine learning. Work github profile: benjamini-huma
Location: Oxford
Blog: benjaminirving.github.io
Benjamin Irving's Projects
array-python-cpp
A very basic example of how to pass arrays between python and c++ using cython
coreml-simple-demo
Simple demo on how to convert and run a Keras deep learning model on macOS with CoreML
dotfiles
Dotfiles that I use mainly borrowed from others (tmux, vim, alacritty...)
jupyterlab-remote-docker
Working with jupyterlab on a remote docker gpu environment - home project
maskslic
Simple linear iterative clustering (SLIC) in a region of interest (ROI)
matlab-to-html-plot
A simple matlab interface to plot meshes as interactive html plots
matlab-to-html-plot-animated
Convert a matlab mesh to an interactive and animated 3D figure viewable in modern browsers
mesh-silhouette-projection
3D airway mesh modelling and projection onto 2D
mlseminars-autoencoders
Jupyter notebook of my autoencoder presentation
perfusion-slic
Simple Linear Iterative Clustering adapted for 4D DCE-MRI or other perfusion imaging
pieces-of-parts-demo
Demo of using pieces-of-parts based on spatial relationships to improve supervoxel classification probabilities
pkview_help_files
Brief documentation for PkView (http://pkview.readthedocs.org/en/latest/)
python-debian-packaging-example
Simple example of packaging a python app for debian using dh-virtualenv
quantiphyse
Application for analysis and modelling of volumetric medical imaging data
quantiphyse-docs
Documentation for Quantiphyse
segmentation-morphology
A simple method to segment tubular like objects using morphological reconstruction
simplelinearroc
A wrapper for matlab functions that provides a simple linear classifier and object oriented ROC plot
ssima-2018-tutorial-deep-learning-med-segmentation
Tutorial on deep learning for medical image segmentation for SSIMA 2018
unet-nifti-gradio
Exploring an interface for nifti segmentation using gradio
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