benediktrauscher Goto Github PK

bene200.github.io

My GitHub pages site

biojs-human-tissues

Simple visualisation of human tissues

biojs-stringdb

Very simple module to interact with the API of the STRING databse

biojs-vapor

A BioJS usecase

biojs-xpression

Visualisation of tissue-specific gene expression data

biojsshiny

The BioJS widgets we integrated into Shiny at the hackathon

carpools

Exploratory data analysis for pooled CRISPR/Cas9 screens

crispr_screen_correlation

A short analysis of the reproducibility in pooled CRISPR-Cas9 dropout screens.

cytoscape.js-edgehandles

Edge creation extension for Cytoscape.js

dot_bracket_notation

Dot Bracket Notation repository for Protein Prediction II

drawrnajs

Draw RNA secondary structures

galaxyjs

A Javascript library for interacting with the Galaxy API

grnai-vis-compare

grnai-vis-phenotypes

Gene to phenotype association visualisation

gscreend

Phenotype detection in pooled genetic perturbation screens

homework-3

This is an exercise for Protein Prediction 2. Given live data from the site reddit, edit the function runVis() in vis.js and try to create a small visualization

ics

Supplementary computer code to reproduce analyses and figures in the manuscript "High speed fluorescence image-enabled cell sorting".

immersenet

Immersive visualisation of genetic interactions.

lfs_test

mini-express-example

Minimal example of how to send data content from a client side file upload to a server via HTTP and save it to file.

msa

Modular BioJS compoment for a multiple sequence alignment

msa-tree

A modular combination of MSA viewer and phylogenetic tree viewer

msar

The BioJS MSA viewer wrapped into an R package

primermap

loads a sequence:primer map

quickblast

Leightweight Javascript interface for the EMBL-EBI BLAST URL API

registry-ui

The BioJS registry frontend

vapor-backend

Backend of VAPoR

vapor-frontend

Frontend of VAPoR