baharhazal Goto Github PK

autoreject

Automated rejection and repair of bad trials/sensors in M/EEG

bctpy

brain connectivity toolbox for python

bids-examples

A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.

brian2

Brian is a free, open source simulator for spiking neural networks.

cluster

Docs on cluster

eegmapping

Mapping Oscillations & 1/f in EEG data.

fc_geodesic

code for NIMG paper

mne-python

MNE : Magnetoencephalography (MEG) and Electroencephalography (EEG) in Python

multipanelfigures

Short tutorial on making publication-ready multipanel figures with Matplotlib

neural_network_dynamics

neurolib

Easy whole-brain modeling for computational neuroscientists 👩‍🔬💻🧠

notebook_papers

I provide here IPython notebooks for our research papers, see the publication list in https://github.com/yzerlaut/notebook_papers/blob/master/README.md

nulink

opendata

A collection / listing of openly available datasets in (mostly human) electrophysiology.

ptitprince

python version of raincloud

scfc-coupling

scripts for extracting data and analysis

scripts

prepare data for TVB

sifirdan-ileri-seviyeye-python-programlama

Udemy üzerindeki Python kurslarında kullanılan materyaller

tme

This code package is for the Tensor-Maximum-Entropy (TME) method. This method generates random surrogate data that preserves a specified set of first and second order marginal moments of a data tensor, which makes it well equipped to test for the null hypothesis that a structure in data is an epiphenomenon of these specified set of primary features of the data tensor. The random surrogate data are sampled from a maximum entropy distribution. This distribution unlike traditional maximum entropy method have constraints on the marginal first and second moments of the tensor mode.

tvb-data

This repository contains demo data for TVB software. Some of these files are used in TVB Demos

tvb-framework

The Virtual Brain framework. Requires tvb-library

tvb-library

The science behind The Virtual Brain

tvb-pipeline

INS TNG pipeline for TVB simulations

tvb-recon

Tools for creating full TVB models from individual anatomical scans

tvb-root

Main TVB codebase

yadex_tvb

Zerlaut et al. AdEx mean field model (https://www.biorxiv.org/content/biorxiv/early/2017/11/12/168385.full.pdf); Prepared for TVB by Lionel Kusch