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Faizan Badami's Projects

cs193p-winter-2017 icon cs193p-winter-2017

These are the lectures, slides, reading assignments, and problem sets for the 'Developing iOS 10 Apps with Swift' CS193p course offered at the Stanford School of Engineering and available on iTunes U.

dynamics_matrices icon dynamics_matrices

Matlab and SPM based code to extract features of network dynamics from neurophysiological recordings

healthy-brain-network-preproc icon healthy-brain-network-preproc

Preprocessing pipeline for the Healthy brian network EEG data (http://fcon_1000.projects.nitrc.org/indi/cmi_healthy_brain_network/)

kmodes icon kmodes

Python implementations of the k-modes and k-prototypes clustering algorithms, for clustering categorical data

mrtrix3 icon mrtrix3

MRtrix provides a set of tools to perform various advanced diffusion MRI analyses, including constrained spherical deconvolution (CSD), probabilistic tractography, track-density imaging, and apparent fibre density

qsiprep icon qsiprep

Preprocessing and reconstruction of diffusion MRI

spectralevents icon spectralevents

Toolbox for detecting and analyzing rhythms as transient spectral events

spm icon spm

BIDS App containing an instance of the SPM software.

su2 icon su2

SU2: An Open-Source Suite for Multiphysics Simulation and Design

t1_nose_wrapping_fix icon t1_nose_wrapping_fix

How to fix wrapping artifact in T1 imaging for scans that were not planned correctly at the scanner

virtuallesion icon virtuallesion

These Notebooks calculate the likeliness of the existens of a fiber bundle with LiFEs Virtual Lesion approach. The probability will be difined based on the Strength of Evidence.

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