Comments (1)
will go into v1.2.2
from bactopia.
Related Issues (20)
- Error linking to bactopia results for ariba tool[bug] HOT 5
- roary module in pangenome failed [bug] HOT 10
- --reference file not working for snippy tool [bug] HOT 4
- Error executing process > 'BACTOPIATOOLS:PANGENOME:CLONALFRAMEML:IQTREE (start-tree) [bug] HOT 10
- [bug] (or user error) kraken2 db not found HOT 1
- Conda create not working for bactopia 3.0.0 HOT 5
- [bug] Poor quality / unmappeable samples cause `snippy-core` to fail with a confusing erorr message
- Bactopia-tools eggnog - decorate_gff option HOT 2
- [bug]Process `BACTOPIA:ASSEMBLER:ASSEMBLER_MODULE (reads)` terminated with an error exit status (1) HOT 33
- 2024 Bactopia Usage Survey
- [bug] RuntimeError from Gubbins via Singularity in Snippy subworkflow HOT 4
- [bug] cleanyerreads workflow fails in bactopia 3.0.1 HOT 1
- [bug] bactopia tools depend on uninstallable bioperl-1.7.2 HOT 15
- Staphtyper module compilation error HOT 2
- pre-existing bakta_db?[question] HOT 2
- Module installation HOT 4
- Use local downloaded models for medaka in dragonflye module [feature] HOT 2
- [bug] PIRATE cannot run because of unexpected extension HOT 3
- How to mix public and local files HOT 7
- Summary can't find the samples HOT 31
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from bactopia.