bacemdatascience Goto Github PK
Name: Bacem Saada
Type: User
Name: Bacem Saada
Type: User
Plot allele frequencies in VCF files
Python package to annotate and visualize gene fusions.
Allele frequency filter app
AltAnalyze is a multi-functional and easy-to-use software package for automated single-cell and bulk gene and splicing analyses. Easy-to-use precompiled graphical user-interface versions available from our website.
Annotated data.
A Bayesian framework for the analysis and interpretation of rare genetic variants
BERMUDA (Batch Effect ReMoval Using Deep Autoencoders) is a novel transfer-learning-based method for batch correction in scRNA-seq data.
Bioinformatics of Cancer Genomics 2018 workshop
an R package for integrative network-based analysis of gene somatic mutation and gene expression data to identify cancer drivers
biotoolsregistry : discovery portal for bioinformatics
R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.
Bioinformatic pipeline for finding somatic variants from NGS-data. This pipeline is in progress and will be improved regularly. The aim is to make a simple to use pipeline that can produce high-quality variant calls.
BreakID: genomics breakpoints identification to detect gene fusion events using discordant pairs and split read
Batch Effect Correction with Unknown Subtypes for scRNA-seq Data
Open-source software pipeline for cancer classification from high-throughput data using machine learning.
cancereffectsizeR: an R package to measure the cancer effect size of somatic mutations
Scripts for Bioinformatics Analysis of Cancer.
cBioPortal for Cancer Genomics
Build predicted cell-cell interaction networks from single-cell data.
A BLAST-like Toolkit for large-scale scRNA-seq Data Querying and Annotation.
Visualize scRNA-seq results.
R package containing the Cerebro application.
R package containing functions to prepare single-cell transcriptomics data saved in a Seurat object for visualization in Cerebro, as well as perform few analytical procedures.
ChimPipe: Accurate detection of fusion genes and transcription-induced chimeras from RNA-seq data
Scripts for intra-chromosomal analysis of gene expression in breast cancer
Clustering through Imputation and Dimensionality Reduction
Gene Fusion Visualiser
Inferring and visualizing clonal evolution in multi-sample cancer sequencing
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.