Giter Club home page Giter Club logo

Comments (9)

florencio-mazzoldi avatar florencio-mazzoldi commented on May 27, 2024 
python --version
Python 2.7.11

from molecular-design-toolkit.

florencio-mazzoldi avatar florencio-mazzoldi commented on May 27, 2024 
which python
/Library/Frameworks/Python.framework/Versions/2.7/bin/python

from molecular-design-toolkit.

florencio-mazzoldi avatar florencio-mazzoldi commented on May 27, 2024 
pip --version
pip 7.1.2 from /Library/Frameworks/Python.framework/Versions/2.7/lib/python2.7/site-packages (python 2.7)

from molecular-design-toolkit.

florencio-mazzoldi avatar florencio-mazzoldi commented on May 27, 2024

I just upgraded pip to 8.1.2

from molecular-design-toolkit.

avirshup avatar avirshup commented on May 27, 2024

Actually, this might be expected for the default mac system installation - everything needs to be installed with sudo. @florencio-mazzoldi, could you try sudo pip install -U moldesign?

from molecular-design-toolkit.

florencio-mazzoldi avatar florencio-mazzoldi commented on May 27, 2024

It all worked with sudo.

python -c "import moldesign; moldesign.data.print_environment()"
No config file found at /Users/flo/.moldesign/moldesign.yml - using defaults
{"env": {"platform": "darwin", "version": "2.7.11 (v2.7.11:6d1b6a68f775, Dec  5 2015, 12:54:16) \n[GCC 4.2.1 (Apple Inc. build 5666) (dot 3)]"}, "versions": {"Bio": "1.67", "jupyter": "???", "jupyter_client": "4.3.0", "pyccc": "0.6.5", "jupyter_core": "4.1.0", "openbabel": "FAILED", "matplotlib": "1.5.1", "moldesign": "0.7.2", "pyscf": "FAILED", "simtk": "FAILED", "IPython": "5.0.0", "docker": "1.9.0", "pint": "0.7.2", "numpy": "1.11.1", "ipywidgets": "5.2.2", "nbmolviz": "0.6.6"}}

from molecular-design-toolkit.

avirshup avatar avirshup commented on May 27, 2024

Reopening this, because the documentation needs to reflect that this pretty common situation! We certainly need to update the API docs, but should probably update the web page and readme as well.

from molecular-design-toolkit.

avirshup avatar avirshup commented on May 27, 2024

These appear to be general python/pip problems, not specific to MDT. Solution is to start pushing users towards conda packages.

from molecular-design-toolkit.

hainm avatar hainm commented on May 27, 2024 
pip install --user

should work

from molecular-design-toolkit.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.