attractorlu Goto Github PK

allenccf

Tools to work with Allen Inst CCF data in matlab

attractorlu

Config files for my GitHub profile.

awesome_neuropixels

A curated list of awesome Neuropixels resources.

behavior_segmentation_paper

birdbrain

A library for viewing songbird brain atlases (European starling, Canary, Zebra finch, Pigeon, Mustached bat)

bootcamp

Caltech Introduction to Programming for the Biological Science Bootcamp

bpod-cad

CAD files for the Bpod behavior measurement system

caltech-tutorial

Material for the Caltech tutorial on deep learning and tensor methods

caltech_datasai_neuroscience_23

A course organized by the Chen Institute for Neuroscience at Caltech on data analysis techniques in neuroscience

ephysio

Python code for reading ephys files

handy_functions_matlab

kilosort

GPU code for spike sorting

lovelyplots

Matplotlib style sheets to nicely format figures for scientific papers, thesis and presentations while keeping them fully editable in Adobe Illustrator.

others

pyaudioanalysis

Python Audio Analysis Library: Feature Extraction, Classification, Segmentation and Applications

screenreader

Circuit diagram for a phototransistor "screenreader"

sortingquality

Functions to assess quality of spike sorting results

stimbarcoduino

Barcode generator for synchronizing multiple recording devices

stimuli

Stimuli generation scripts. For experiments that study neural mechanism of vision

syllable-detector-swift

Using Core Audio to perform STFT and pass the amplitude data into a Matlab trained neural network.

theodore

stimulus presentation program for tsao lab

vocalization-segmentation

Simple python algorithms for segmenting animal (songbird, mice) vocalizations into notes and syllables using Dynamic Thresholding and Continuity Filtering.

vocalpy

A core package for acoustic communication research in Python