Amulya Shastry's Projects
Amulya Shastry portfolio
BETYDb Project
Bayesian Hierarchical Modeling for Clustering Single Cell Genomic Data
A basic R package to demonstrate a cycle of code development
Robust, tested workflows for RNA-seq, ChIP-seq and other high-throughput sequencing analysis
Moon is a minimal, one column jekyll theme.
fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
Multi-subject Single Cell Deconvolution
Materials for the BRITE-REU programming workshops
R package for Matrix and Analysis Metadata Standards
Interactively analyze single cell genomic data
Includes extra tools in the singleCellTK framework that are not available in standard repositories
Worklflow managers are good mkay
NCI CGR laboratory HPV typing analysis workflows