Installation fail with devtools about antsr HOT 5 OPEN

I'm not sure what this means (what caused the problem). It occurred twice FWIW. I ended up trying to install using Method 2 (from command line) listed here: https://github.com/ANTsX/ANTsR. That worked without errors.

from antsr.

Thanks for the workaround. I've not used cmaker in a long time - what version of cmake does it provide? If it's too old, that might be the cause of compilation problems.

from antsr.

I'm not sure how to check that - how do I check what version of cmaker it provides? That may well be the issue, because before trying the second method (command line install sequence using R CMD INSTALL), I in fact updated to the latest cmaker.

from antsr.

Looks like CMake 3.11 from here

https://github.com/stnava/cmaker/blob/master/DESCRIPTION

I think but I'm not sure that R CMD install uses system commands, so if you have a newer cmake in your environment, that might be why it works.

from antsr.

I have reproduced this error via Docker, when installing using devtools::install and remotes::install

#8 6553.4 Error: package or namespace load failed for ‘ANTsR’ in dyn.load(file, DLLpath = DLLpath, ...):
#8 6553.4  unable to load shared object '/usr/local/lib/R/site-library/00LOCK-ANTsR/00new/ANTsR/libs/ANTsR.so':
#8 6553.4   /usr/local/lib/R/site-library/00LOCK-ANTsR/00new/ANTsR/libs/ANTsR.so: undefined symbol: composeDisplacementFields
#8 6553.4 Error: loading failed
#8 6553.4 Execution halted

This is using R 4.0.5 and CMake 3.25.3, so I think it's not cmake.

from antsr.