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shamanpi avatar shamanpi commented on June 16, 2024

Hello,
Without more information I can make a few guesses, but the most likely issue is the compiler can't find the GNU Scientific Library (GSL) code. If you don't know if it's installed on your system, then I'd suggest using either sudo apt-get install libgsl-dev in Linux or brew install gsl in MacOS and then trying again.

Otherwise, there was a similar discussion here about how to point the compiler to the correct path if GSL is in fact correctly installed on your system, by using ANGSD's Makefile.

If neither of those work fully, let me know and I'll try and help further.
Cheers,
Samuel Hamann

from angsd-wrapper.

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