alesssia Goto Github PK

2020-11-180-kcl

KCL Unix and Git workshop -- Winter session

2022-04-15-ukhsa-online

SWC-like Workshop: Introduction to Git

aid-isa

AID-ISA extracts biologically relevant biclusters from microarray gene expression data by leveraging additional knowledge.

alessia_s_cookbok

Created as part of a SW Carpentries workshop

alessia_s_zoo

Created as part of SWC workshop

alessia_s_zoo_20200729

Repo created as part of a Carpentries workshop

alessia_s_zoo_20201216

This repo is part of a Software Carpentries workshop

alessia_s_zoo_20211126

This repository has been created during a workshop

alessia_s_zoo_2021_06_16

This repo has been created as part of SC workshop

alessia_s_zoo_20220316

This repo has been created as part of SC workshop

alesssia.github.io

Source code for personal web page

covid-19

Analysis of the data from the COVID-19 Radar app

ggman

R package to create manhattan plots using ggplot

lab_lettere_2009_10

Material for the course "Laboratorio di Informatica" (ay 2009/10)

mag

Assembly and binning of metagenomes

manhattanplotter

map

A metagenomic analysis pipeline

methylseq

Methylation (Bisulfite-Sequencing) analysis pipeline using Bismark or bwa-meth + MethylDackel

microbiome_metabolome_interplay

Custom code for the manuscript "Interplay between the human gut microbiome and host metabolism"

php-assistant

A cross-platform desktop app for testing PHP snippets

poppante

PopPAnTe: population and pedigree association testing for quantitative data

rcasc

rCASC: reproducible Classification Analysis of Single Cell Sequencing Data

rpedgene

scalabridge-starter-project

shell-novice

Software Carpentry introduction to the shell for novices.

short_intro_stats

Short introduction to statistics for medical residents

sistemi_elab_info_i_2012_13

Material for the course "Sistemi di elaborazione dell'Informazione I" (ay 2012/13)

talks

Slidedecks for alesssia's talks

timesaver

A bunch of R functions

vrms-rpm

Reports nonfree software installed on an RPM-based GNU/Linux system.